exRNAdisease

Entry Detail

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General Information

Database ID: exR0355329 RNA Name: H19 RNA Type: lncRNA Chromosome: chr11 Starnd: - Coordinate: Start Site(bp): 1995176 End Site(bp): 2001470 External Links: ENSG00000130600

Disease Information

Disease Name: Rheumatoid Arthritis Disease Category: Musculoskeletal Diseases MeSH ID: D001172 Type: Diseases Category/Musculoskeletal Diseases Alias: Arthritis, Rheumatoid//Rheumatoid Arthritis

Expression Detail

GEO ID: GSE94519 Description: Long noncoding RNAs expression profile in patients with rheumatoid arthritis Experimental Design: Disease vs Control Case Disease Type: Rheumatoid Arthritis Case Disease SubType: NA Case Sample: Rheumatoid Arthritis Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-519c-3p chr19 53686522 53686543 + hsa-miR-20a-5p chr13 91351072 91351094 + hsa-miR-148a-3p chr7 25949922 25949943 - hsa-miR-130b-3p chr22 21653354 21653375 + hsa-miR-20b-5p chrX 134169850 134169872 - hsa-miR-4701-5p chr12 48772014 48772035 - hsa-miR-4761-5p chr22 19963755 19963775 + hsa-miR-3194-5p chr20 51452948 51452968 - hsa-miR-625-5p chr14 65471116 65471136 + hsa-miR-93-5p chr7 100093815 100093837 - hsa-miR-140-5p chr16 69933103 69933124 + hsa-miR-585-3p chr5 169263616 169263634 - hsa-miR-6893-3p chr8 144435551 144435572 - hsa-miR-671-5p chr7 151238449 151238471 + hsa-miR-301a-3p chr17 59151149 59151171 - hsa-miR-6512-3p chr2 177313811 177313832 - hsa-miR-941 chr20 63919551 63919573 + hsa-miR-152-3p chr17 48037174 48037194 - hsa-miR-519b-3p chr19 53695263 53695284 + hsa-miR-588 chr6 126484646 126484666 + hsa-miR-130a-3p chr11 57641252 57641273 + hsa-miR-6720-5p chr6 1390359 1390381 - hsa-miR-29a-3p chr7 130876748 130876769 - hsa-miR-194-5p chr11 64891404 64891425 - hsa-miR-106a-5p chrX 134170244 134170266 - hsa-miR-3605-3p chr1 33332405 33332427 - hsa-miR-4295 chr10 112634180 112634197 + hsa-miR-106b-5p chr7 100094043 100094063 - hsa-miR-29c-3p chr1 207801865 207801886 - hsa-miR-346 chr10 86264747 86264769 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE94519 Sample Source: Blood Source Fraction: Serum Platform: GPL20115 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 1224 Sample treatment protocol: All blood samples were separately collected and sequentially centrifuged at 2000 rpm for 10 min. The cell-free serum from the supernatant was stored at -80°C for further detection. RNA Extract protocol: RNA was prepared using the Versagene Blood RNA Purification kit (Gentra Systems, Minneapolis MN). RNA library preparation protocol: Cyanine-3 (Cy3) labeled cRNA was prepared from 0.5 ug RNA using the One-Color Low RNA Input Linear Amplification PLUS kit (Agilent) according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA