Entry Detail



General Information

Database ID:exR0355509
RNA Name:LINC00324
RNA Type:lncRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):8220642End Site(bp):8224043
External Links:ENSG00000178977



Disease Information

Disease Name:Rheumatoid Arthritis
Disease Category:Musculoskeletal Diseases
MeSH ID:D001172
Type:Diseases Category/Musculoskeletal Diseases
Alias:Arthritis, Rheumatoid//Rheumatoid Arthritis



Expression Detail

GEO ID:GSE94519
Description:Long noncoding RNAs expression profile in patients with rheumatoid arthritis
Experimental Design:Disease vs Control
Case Disease Type:Rheumatoid Arthritis
Case Disease SubType:NA
Case Sample:Rheumatoid Arthritis
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACTG1
chr17
81509971
81523847
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-154-3p
chr14
101059805
101059826
+
hsa-miR-362-5p
chrX
50008968
50008991
+
hsa-miR-487a-3p
chr14
101052494
101052515
+
hsa-miR-516b-5p
chr19
53736860
53736881
+
hsa-miR-769-5p
chr19
46018961
46018982
+
hsa-miR-214-5p
chr1
172138857
172138878
-
hsa-miR-151a-5p
chr8
140732623
140732643
-
hsa-miR-545-5p
chrX
74287164
74287185
-
hsa-miR-151b
chr14
100109438
100109455
-
hsa-miR-3126-5p
chr2
69103691
69103712
+
hsa-miR-3164
chr11
69083185
69083206
+
hsa-miR-500b-5p
chrX
50010682
50010699
+
hsa-miR-3200-5p
chr22
30731569
30731590
+
hsa-miR-6820-3p
chr22
37967603
37967624
+
hsa-miR-6875-5p
chr7
100868041
100868061
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE94519
Sample Source:Blood
Source Fraction:Serum
Platform:GPL20115
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1224
Sample treatment protocol:All blood samples were separately collected and sequentially centrifuged at 2000 rpm for 10 min. The cell-free serum from the supernatant was stored at -80°C for further detection.
RNA Extract protocol:RNA was prepared using the Versagene Blood RNA Purification kit (Gentra Systems, Minneapolis MN).
RNA library preparation protocol:Cyanine-3 (Cy3) labeled cRNA was prepared from 0.5 ug RNA using the One-Color Low RNA Input Linear Amplification PLUS kit (Agilent) according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA