Entry Detail



General Information

Database ID:exR0355864
RNA Name:PITPNA-AS1
RNA Type:lncRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):1516931End Site(bp):1518096
External Links:ENSG00000236618



Disease Information

Disease Name:Rheumatoid Arthritis
Disease Category:Musculoskeletal Diseases
MeSH ID:D001172
Type:Diseases Category/Musculoskeletal Diseases
Alias:Arthritis, Rheumatoid//Rheumatoid Arthritis



Expression Detail

GEO ID:GSE94519
Description:Long noncoding RNAs expression profile in patients with rheumatoid arthritis
Experimental Design:Disease vs Control
Case Disease Type:Rheumatoid Arthritis
Case Disease SubType:NA
Case Sample:Rheumatoid Arthritis
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-25-3p
chr7
100093571
100093592
-
hsa-miR-32-5p
chr9
109046272
109046293
-
hsa-miR-92a-3p
chrX
134169544
134169565
-
hsa-miR-223-3p
chrX
66018937
66018958
+
hsa-miR-363-3p
chrX
134169382
134169403
-
hsa-miR-367-3p
chr4
112647877
112647898
-
hsa-miR-524-5p
chr19
53711017
53711038
+
hsa-miR-520d-5p
chr19
53720111
53720130
+
hsa-miR-92b-3p
chr1
155195237
155195258
+
hsa-miR-219a-2-3p
chr9
128392632
128392653
-
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE94519
Sample Source:Blood
Source Fraction:Serum
Platform:GPL20115
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1224
Sample treatment protocol:All blood samples were separately collected and sequentially centrifuged at 2000 rpm for 10 min. The cell-free serum from the supernatant was stored at -80°C for further detection.
RNA Extract protocol:RNA was prepared using the Versagene Blood RNA Purification kit (Gentra Systems, Minneapolis MN).
RNA library preparation protocol:Cyanine-3 (Cy3) labeled cRNA was prepared from 0.5 ug RNA using the One-Color Low RNA Input Linear Amplification PLUS kit (Agilent) according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA