exRNAdisease

Entry Detail

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General Information

Database ID: exR0373410 RNA Name: ABCA5 RNA Type: mRNA Chromosome: chr17 Starnd: - Coordinate: Start Site(bp): 69244311 End Site(bp): 69327244 External Links: ENSG00000154265

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC087289.3 chr17 75898645 75930129 - FEM1B chr15 68277745 68295862 + FKBP8 chr19 18531751 18544077 - GTF3C4 chr9 132670035 132694953 + KAZN chr1 13892792 15118043 + MATR3 chr5 139273752 139331671 + MRPL38 chr17 75898643 75905413 - ORAI2 chr7 102433106 102456825 + POGZ chr1 151402724 151459494 - PPARGC1B chr5 149730298 149855022 + RPS4X chrX 72255679 72277248 - SUMO2 chr17 75165586 75182959 - SUPT16H chr14 21351476 21384019 - miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA