exRNAdisease

Entry Detail

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General Information

Database ID: exR0373435 RNA Name: ABCD1 RNA Type: mRNA Chromosome: chrX Starnd: + Coordinate: Start Site(bp): 153724856 End Site(bp): 153744755 External Links: ENSG00000101986

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ARPP19 chr15 52547045 52569883 - BCL2L2 chr14 23298790 23311759 + BCL2L2-PABPN1 chr14 23306835 23325369 + HLA-A chr6 29941260 29945884 + HOXB4 chr17 48575507 48578350 - MKNK2 chr19 2037465 2051244 - MT-CO2 chrMT 7586 8269 + NASP chr1 45583846 45618904 + NCL chr2 231453531 231483641 - PABPN1 chr14 23321289 23326185 + TTC3 chr21 37073226 37203112 + ZNF324B chr19 58451611 58457833 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA