exRNAdisease

Entry Detail

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General Information

Database ID: exR0373450 RNA Name: ABHD11 RNA Type: mRNA Chromosome: chr7 Starnd: - Coordinate: Start Site(bp): 73736094 End Site(bp): 73738867 External Links: ENSG00000106077

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ANP32E chr1 150218417 150236156 - APLP1 chr19 35867899 35879791 + CHMP5 chr9 33264879 33282070 + ENO2 chr12 6913745 6923698 + EXOSC9 chr4 121801317 121817021 + GNB1 chr1 1785285 1891117 - ITCH chr20 34363241 34540748 + MED24 chr17 40019097 40061215 - MRPS27 chr5 72219409 72320646 - MTRR chr5 7851186 7906025 + NUP153 chr6 17615035 17706834 - PAN2 chr12 56316223 56334053 - SEC24C chr10 73744372 73772161 + SNRNP70 chr19 49085419 49108605 + USP28 chr11 113797874 113875570 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand NEAT1 chr11 65422774 65445540 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA