exRNAdisease

Entry Detail

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General Information

Database ID: exR0373460 RNA Name: ABHD17A RNA Type: mRNA Chromosome: chr19 Starnd: - Coordinate: Start Site(bp): 1876810 End Site(bp): 1885547 External Links: ENSG00000129968

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand SLC20A2 chr8 42416475 42541926 - PPP4R3A chr14 91457611 91510554 - AP001931.1 chr11 57741779 57804771 + EFNB2 chr13 106489745 106535662 - DNAJB1 chr19 14514769 14529770 - RPS15 chr19 1438358 1440494 + MSH5-SAPCD1 chr6 31740020 31764851 + TUBB2A chr6 3153666 3157544 - NBEAL2 chr3 46979666 47009704 + PRPF6 chr20 63981132 64033100 + PIP5K1C chr19 3630183 3700479 - CEBPG chr19 33373685 33382686 + NAA16 chr13 41311267 41377030 + SUPT5H chr19 39436156 39476670 + MT-CO2 chrMT 7586 8269 + LUC7L2 chr7 139340359 139423457 + AC091167.2 chr15 90249556 90272208 + ELMO2 chr20 46366050 46432985 - HNRNPH1 chr5 179614178 179634784 - ACOT7 chr1 6264269 6394391 - SETD5 chr3 9397615 9479240 + ABHD17C chr15 80679684 80755621 + GPX4 chr19 1103926 1106791 + EIF5 chr14 103333544 103345025 + NUB1 chr7 151341699 151378449 + FGFR1 chr8 38400215 38468834 - NF2 chr22 29603556 29698598 + RBCK1 chr20 407498 430966 + UPF1 chr19 18831938 18868236 + SLC25A3 chr12 98593591 98606379 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA