exRNAdisease

Entry Detail

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General Information

Database ID: exR0373464 RNA Name: ABHD3 RNA Type: mRNA Chromosome: chr18 Starnd: - Coordinate: Start Site(bp): 21650901 End Site(bp): 21704780 External Links: ENSG00000158201

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ELOB chr16 2771414 2777297 - FP565260.3 chr21 5022493 5040666 + HNRNPK chr9 83968083 83980616 - ICOSLG chr21 44217014 44240966 - IRGQ chr19 43584369 43596135 - MTRNR2L12 chr3 96617188 96618236 - NAA10 chrX 153929225 153935080 - NOP53 chr19 47745546 47757058 + ORC4 chr2 147930397 148021604 - PEG10 chr7 94656325 94669695 + POU3F3 chr2 104853287 104858574 + RPL3 chr22 39312882 39320389 - SATB2 chr2 199269500 199471266 - SOS2 chr14 50117130 50231578 - ZNF653 chr19 11483427 11505839 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-3654 chr7 133034860 133034878 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA