exRNAdisease

Entry Detail

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General Information

Database ID: exR0373466 RNA Name: ABHD5 RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 43690108 End Site(bp): 43734371 External Links: ENSG00000011198

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand KIAA1143 chr3 44737661 44761619 - RPLP1 chr15 69452814 69456205 + LGALS3BP chr17 78971238 78979947 - ATF7IP chr12 14365632 14502935 + TOMM22 chr22 38681957 38685421 + TIAF1 chr17 29073521 29078857 - TMSB4X chrX 12975110 12977227 + NIPSNAP1 chr22 29554808 29581327 - DCAF10 chr9 37800554 37867666 + ZFAT chr8 134477788 134713049 - THOC5 chr22 29505879 29555216 - CNN2 chr19 1026586 1039068 + GALNT2 chr1 230057990 230282122 + MYO18A chr17 29071124 29180412 - PLBD2 chr12 113358566 113391629 + HS3ST3B1 chr17 14301081 14349404 + TUBB4B chr9 137241287 137243707 + RPL18A chr19 17859910 17864153 + TUBB chr6 30720352 30725426 + AC010422.3 chr19 12643831 12648397 - CBSL chr21 6444869 6468040 - ATP5MC3 chr2 175176258 175184607 - CBS chr21 43053191 43076943 - ANO10 chr3 43354859 43691594 - ZNF75D chrX 135248920 135344109 - SEH1L chr18 12947133 12987536 + DICER1 chr14 95086228 95158010 - GDI1 chrX 154436913 154443467 + PTMA chr2 231706895 231713541 + HSD17B4 chr5 119452473 119637199 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand U73166.1 chr3 50260303 50263358 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA