exRNAdisease

Entry Detail

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General Information

Database ID: exR0373489 RNA Name: ACAD10 RNA Type: mRNA Chromosome: chr12 Starnd: + Coordinate: Start Site(bp): 111686056 End Site(bp): 111757107 External Links: ENSG00000111271

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand NDUFA10 chr2 239892450 240025345 - GPCPD1 chr20 5544439 5611006 - IPP chr1 45694324 45750653 - MRM2 chr7 2234195 2242205 - SLAMF6 chr1 160485030 160523262 - MYH9 chr22 36281277 36388067 - SLC52A2 chr8 144354135 144361272 + CPT1C chr19 49690898 49713731 + PSMD11 chr17 32444379 32483319 + HMGB2 chr4 173331376 173334432 - SP110 chr2 230167293 230225729 - CBX3 chr7 26201162 26213607 + DNAJC25 chr9 111631334 111654351 + PTP4A3 chr8 141391995 141432454 + CMTR1 chr6 37433219 37482827 + PLXNA1 chr3 126988594 127037392 + ZBED4 chr22 49853844 49890080 + ST8SIA1 chr12 22063773 22437041 - ACTN1 chr14 68874143 68979440 - UBE2Z chr17 48908407 48929056 + GRK2 chr11 67266473 67286556 + DCTN2 chr12 57530102 57547331 - FOXM1 chr12 2857681 2877155 - MT-ND1 chrMT 3307 4262 + VIPAS39 chr14 77426675 77457952 - EPM2AIP1 chr3 36985043 36993131 - ST6GAL1 chr3 186930502 187078553 + TPGS2 chr18 36777647 36829216 - AL132780.3 chr14 22946270 22982258 - FSCN3 chr7 127591409 127602144 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA