exRNAdisease

Entry Detail

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General Information

Database ID: exR0373495 RNA Name: ACADS RNA Type: mRNA Chromosome: chr12 Starnd: + Coordinate: Start Site(bp): 120725774 End Site(bp): 120740008 External Links: ENSG00000122971

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004832.3 chr22 30409255 30428990 + AP002990.1 chr11 62559603 62591531 - CD52 chr1 26317958 26320523 + CHD4 chr12 6570082 6614524 - CYSTM1 chr5 140175156 140282052 + DNAJC5 chr20 63895126 63936031 + EEF1G chr11 62559596 62574086 - EIF2B1 chr12 123620406 123633766 - EIF3J chr15 44537125 44563029 + EIF5AL1 chr10 79512601 79516440 + GPAT2 chr2 96021946 96039451 - HNRNPA2B1 chr7 26173057 26201529 - IMP3 chr15 75639085 75648706 - LRRK1 chr15 100919327 101078257 + MCM7 chr7 100092728 100101940 - MLH1 chr3 36993350 37050846 + MTFP1 chr22 30425623 30429054 + PFKL chr21 44300051 44327376 + PIP4K2C chr12 57591174 57603418 + PPP2R1A chr19 52190048 52229518 + RPLP1 chr15 69452814 69456205 + RPS3 chr11 75399515 75422280 + SMAD7 chr18 48919853 48952052 - STIM1 chr11 3854527 4093210 + TBX3 chr12 114670255 114684175 - TPI1 chr12 6867119 6870948 + TUBB chr6 30720352 30725426 + UNC119B chr12 120710458 120723640 + VCP chr9 35056064 35072627 - miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA