exRNAdisease

Entry Detail

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General Information

Database ID: exR0373514 RNA Name: ACHE RNA Type: mRNA Chromosome: chr7 Starnd: - Coordinate: Start Site(bp): 100889994 End Site(bp): 100896974 External Links: ENSG00000087085

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand CPNE2 chr16 57092583 57148369 + GNAI2 chr3 50226292 50259362 + GOLGA7 chr8 41490396 41510980 + GORASP1 chr3 39096659 39108363 - HLA-A chr6 29941260 29945884 + PCDHGA1 chr5 141330571 141512981 + PCDHGA10 chr5 141412987 141512979 + PCDHGA11 chr5 141421047 141512975 + PCDHGA12 chr5 141430507 141512975 + PCDHGA2 chr5 141338760 141512975 + PCDHGA3 chr5 141343829 141512979 + PCDHGA4 chr5 141355021 141512975 + PCDHGA5 chr5 141364232 141512979 + PCDHGA6 chr5 141373914 141512979 + PCDHGA7 chr5 141382739 141512975 + PCDHGA8 chr5 141390157 141512979 + PCDHGA9 chr5 141402932 141512979 + PCDHGB1 chr5 141350102 141512979 + PCDHGB2 chr5 141360042 141512979 + PCDHGB3 chr5 141370242 141512975 + PCDHGB4 chr5 141387698 141512979 + PCDHGB5 chr5 141397987 141512979 + PCDHGB6 chr5 141408021 141512979 + PCDHGB7 chr5 141417645 141512979 + PCDHGC3 chr5 141475947 141512977 + PCDHGC4 chr5 141484997 141512979 + PCDHGC5 chr5 141489121 141512979 + PLD3 chr19 40348456 40380439 + UBQLN1 chr9 83659968 83707958 - UQCRHL chr1 15807169 15809348 - miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA