exRNAdisease

Entry Detail

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General Information

Database ID: exR0373579 RNA Name: ACTR10 RNA Type: mRNA Chromosome: chr14 Starnd: + Coordinate: Start Site(bp): 58200080 End Site(bp): 58235636 External Links: ENSG00000131966

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand HIBCH chr2 190189735 190344193 - CCNG1 chr5 163437569 163446151 + PPP2CA chr5 134194332 134226073 - TOMM20 chr1 235109341 235128837 - ACTB chr7 5527148 5563784 - APP chr21 25880550 26171128 - PTK2B chr8 27311482 27459391 + CTDSP2 chr12 57819927 57846729 - SLC6A9 chr1 43991500 44031467 - B2M chr15 44711487 44718877 + RPS20 chr8 56067295 56074581 - NUDC chr1 26900238 26946871 + AURKA chr20 56369389 56392337 - PABPC3 chr13 25095868 25099254 + TUBA3C chr13 19173772 19181824 - UBA6 chr4 67612652 67701155 - CAND1 chr12 67269358 67319953 + MGRN1 chr16 4616493 4690974 + ARF1 chr1 228082660 228099212 + ALDOA chr16 30064164 30070457 + MTRNR2L12 chr3 96617188 96618236 - PBX1 chr1 164555584 164899296 + PRKCI chr3 170222424 170305977 + LRRC20 chr10 70298970 70382650 - CCNC chr6 99542387 99568825 - SMARCC1 chr3 47585269 47782106 - TSPAN15 chr10 69451465 69507666 + NID1 chr1 235975830 236065109 - CAMK2G chr10 73812501 73874591 - AIF1L chr9 131096476 131123152 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA