exRNAdisease

Entry Detail

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General Information

Database ID: exR0373661 RNA Name: ADCY1 RNA Type: mRNA Chromosome: chr7 Starnd: + Coordinate: Start Site(bp): 45574140 End Site(bp): 45723116 External Links: ENSG00000164742

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand HLA-A chr6 29941260 29945884 + RBMXL1 chr1 88979456 88992960 - CTTN chr11 70398404 70436584 + SCYL1 chr11 65525077 65538704 + FP565260.1 chr21 5130871 5154658 - ICE1 chr5 5420664 5490220 + GNAS chr20 58839718 58911192 + NFATC2IP chr16 28950807 28967097 + SV2A chr1 149903318 149917844 - GLRX3 chr10 130136391 130184521 + LAMA5 chr20 62307955 62367312 - MFSD1 chr3 158732198 158829719 + TMEM185A chrX 149596556 149631912 - UBXN4 chr2 135741734 135785056 + C6orf62 chr6 24704861 24719998 - SZRD1 chr1 16352575 16398145 + PWP2 chr21 44107373 44131181 + MBP chr18 76978827 77133683 - ATP5MC2 chr12 53632726 53677408 - KLF2 chr19 16324817 16327874 + GAPDH chr12 6534512 6538374 + KAT2A chr17 42113111 42121367 - HUWE1 chrX 53532096 53686728 - RAB5A chr3 19947097 19985175 + PHB2 chr12 6965327 6970753 - MARCKS chr6 113857345 113863475 + SUMO3 chr21 44805617 44818779 - NCOA6 chr20 34689097 34825651 - FBRSL1 chr12 132489551 132585188 + LAMB1 chr7 107923799 108003187 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand LINC00665 chr19 36313067 36331770 - XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA