exRNAdisease

Entry Detail

---



General Information

Database ID: exR0373663 RNA Name: ADCY2 RNA Type: mRNA Chromosome: chr5 Starnd: + Coordinate: Start Site(bp): 7396138 End Site(bp): 7830081 External Links: ENSG00000078295

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand RTN4 chr2 54972187 55112621 - RBBP5 chr1 205086142 205122015 - DMAC1 chr9 7796500 7888380 - HIPK2 chr7 139561570 139777998 - GDI2 chr10 5765223 5842132 - TUFT1 chr1 151540305 151583583 + ACTR1B chr2 97655939 97664044 - NAP1L1 chr12 76036585 76084958 - KREMEN2 chr16 2964216 2968383 + RASSF8 chr12 25959029 26079892 + CTSV chr9 97029677 97039643 - SH3BP4 chr2 234952017 235055714 + ZSCAN10 chr16 3088890 3099295 - PHB2 chr12 6965327 6970753 - ADCY5 chr3 123282296 123449758 - SDCBP chr8 58552924 58582859 + CRABP1 chr15 78340353 78348225 + HSP90AB1 chr6 44246166 44253888 + LIN28A chr1 26410817 26429728 + DSG2 chr18 31498177 31549008 + AURKAIP1 chr1 1373730 1375495 - OGG1 chr3 9749944 9788219 + APEH chr3 49674014 49683971 + GNAS chr20 58839718 58911192 + PSMD10 chrX 108084207 108091549 - SF3B1 chr2 197388515 197435091 - PANK1 chr10 89579497 89645572 - MYL6 chr12 56158161 56163496 + ANAPC15 chr11 72106378 72112780 - YWHAE chr17 1344275 1400222 - miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA