exRNAdisease

Entry Detail

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General Information

Database ID: exR0373664 RNA Name: ADCY3 RNA Type: mRNA Chromosome: chr2 Starnd: - Coordinate: Start Site(bp): 24819169 End Site(bp): 24919839 External Links: ENSG00000138031

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand COL4A5 chrX 108439844 108697545 + GPC3 chrX 133535745 133985594 - ERCC2 chr19 45349837 45370918 - HNRNPL chr19 38836388 38852347 - GMPR chr6 16238587 16295549 + MED12 chrX 71118556 71142454 + PIEZO2 chr18 10666483 11148762 - PIP5K1C chr19 3630183 3700479 - MTRR chr5 7851186 7906025 + IMP4 chr2 130342877 130347967 + PEX2 chr8 76980258 77001044 - RPL4 chr15 66498015 66524532 - CCDC47 chr17 63745255 63776351 - HIGD1A chr3 42784298 42804531 - CYTH1 chr17 78674048 78782297 - MSC chr8 71841549 71844468 - LCOR chr10 96832282 96995959 + KIF1A chr2 240713761 240821036 - SESN3 chr11 95165513 95232541 - RHOC chr1 112701106 112707434 - WDR81 chr17 1716523 1738599 + FAM8A1 chr6 17600302 17611715 + RAN chr12 130872037 130877678 + ANO8 chr19 17323223 17334855 - AKT2 chr19 40230317 40285536 - POTEF chr2 130073535 130129222 - GNB1 chr1 1785285 1891117 - PIH1D1 chr19 49446298 49453497 - NFE2L1 chr17 48048329 48061545 + AL049629.2 chr11 33698261 33722467 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-367-3p chr4 112647877 112647898 - hsa-miR-92b-3p chr1 155195237 155195258 + hsa-miR-155-3p chr21 25574022 25574043 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC073062.1 chr2 13537673 13609168 + AC099329.1 chr3 42785087 42852428 - AL160408.3 chr1 234669523 234696153 - LINC01866 chr2 16970034 16974497 + MEF2C-AS1 chr5 88883328 89466398 + MIR155HG chr21 25561909 25575168 + XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA