exRNAdisease

Entry Detail

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General Information

Database ID: exR0373666 RNA Name: ADCY5 RNA Type: mRNA Chromosome: chr3 Starnd: - Coordinate: Start Site(bp): 123282296 End Site(bp): 123449758 External Links: ENSG00000173175

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand RPS6 chr9 19375715 19380236 - PELP1 chr17 4669774 4704337 - PHF3 chr6 63635820 63779336 + AC010422.3 chr19 12643831 12648397 - GCN1 chr12 120127202 120194715 - PINK1 chr1 20633458 20651511 + TUBB2A chr6 3153666 3157544 - HSP90AA1 chr14 102080738 102139699 - GPRC5C chr17 74424851 74451653 + RHOB chr2 20447074 20449440 + LRFN3 chr19 35935358 35946624 + AC008878.1 chr19 7507052 7519622 + DGKZ chr11 46332905 46380554 + AL136295.5 chr14 24147548 24166452 + MRPL36 chr5 1798385 1801366 - RPL3 chr22 39312882 39320389 - ICE2 chr15 60419609 60479160 - FAM83D chr20 38926312 38953106 + STK39 chr2 167954020 168247595 - THOC5 chr22 29505879 29555216 - ACOT7 chr1 6264269 6394391 - JPT2 chr16 1678256 1702280 + ZNF358 chr19 7515292 7521025 + TUBA1B chr12 49127782 49131397 - SKAP2 chr7 26667068 26995239 - RCC2 chr1 17406760 17439677 - ZNF253 chr19 19865882 19894674 + SLC37A3 chr7 140293693 140404433 - STK10 chr5 172042079 172188224 - RPL8 chr8 144789765 144792587 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC092902.2 chr3 125774714 125797953 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA