exRNAdisease

Entry Detail

---



General Information

Database ID: exR0373667 RNA Name: ADCY6 RNA Type: mRNA Chromosome: chr12 Starnd: - Coordinate: Start Site(bp): 48766194 End Site(bp): 48789037 External Links: ENSG00000174233

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand MACF1 chr1 39081316 39487177 + SLC25A29 chr14 100291116 100306547 - HSP90AB1 chr6 44246166 44253888 + CALM1 chr14 90396502 90408268 + PRRT4 chr7 128350325 128361685 - LCMT1 chr16 25111731 25178231 + FLNA chrX 154348524 154374638 - TPM4 chr19 16067021 16103002 + FADS2 chr11 61792980 61867354 + MYBBP1A chr17 4538897 4555631 - UBB chr17 16380798 16382745 + RNF167 chr17 4940008 4945222 + PUS1 chr12 131929200 131945896 + LRCH4 chr7 100574011 100586129 - SELENOP chr5 42799880 42887392 - ARID1A chr1 26693236 26782104 + PEX19 chr1 160276812 160286348 - IGF2 chr11 2129112 2141238 - FNDC3B chr3 172039578 172401669 + HUWE1 chrX 53532096 53686728 - PDCD7 chr15 65117379 65133808 - LENG8 chr19 54448887 54462037 + SYNM chr15 99098217 99135593 + EME2 chr16 1772810 1781708 + FNTB chr14 64986895 65062652 + SMARCD1 chr12 50085200 50100707 + SNTB2 chr16 69187129 69309052 + ZNF628 chr19 55476617 55484487 + SNRPF chr12 95858928 95903828 + TAZ chrX 154411524 154421726 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC069281.2 chr7 100572232 100578700 - AC138761.1 chr17 22266395 22288301 + XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA