exRNAdisease

Entry Detail

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General Information

Database ID: exR0373694 RNA Name: ADM5 RNA Type: mRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 49688664 End Site(bp): 49690575 External Links: ENSG00000224420

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AOC2 chr17 42844580 42850707 + ATP5F1D chr19 1241746 1244825 + B4GALNT1 chr12 57623409 57633239 - DCXR chr17 82035136 82037709 - ELF4 chrX 130064874 130110716 - GBE1 chr3 81489703 81761645 - LMO2 chr11 33858576 33892076 - MIXL1 chr1 226223618 226227054 + MLXIP chr12 122078756 122147344 + NCAPG2 chr7 158631169 158704804 - PRMT1 chr19 49675786 49689029 + RPL27 chr17 42998273 43002959 + RPL4 chr15 66498015 66524532 - TM9SF4 chr20 32109714 32167258 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand FBXL19-AS1 chr16 30919319 30923269 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA