exRNAdisease

Entry Detail

---



General Information

Database ID: exR0373699 RNA Name: ADORA2A RNA Type: mRNA Chromosome: chr22 Starnd: + Coordinate: Start Site(bp): 24417879 End Site(bp): 24442357 External Links: ENSG00000128271

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand TUBA1A chr12 49184795 49189080 - ILK chr11 6603708 6610874 + RPL23A chr17 28719985 28724359 + TUB chr11 8019244 8106112 + GABARAP chr17 7240008 7242449 - RETREG2 chr2 219176225 219185475 + RPS3 chr11 75399515 75422280 + LMNA chr1 156082573 156140089 + SPECC1L chr22 24270817 24417739 + IFI30 chr19 18173162 18178117 + NFKB2 chr10 102394110 102402524 + RPL9 chr4 39452521 39458949 - MX1 chr21 41420304 41459214 + EIF4B chr12 53006158 53042209 + LRFN4 chr11 66856647 66860475 + CTSH chr15 78921058 78949574 - CHCHD3 chr7 132784870 133082090 - ITGB1 chr10 32900318 33005792 - MTPN chr7 135926760 135977359 - IFFO1 chr12 6538375 6556083 - CLK3 chr15 74598500 74645414 + RPL3 chr22 39312882 39320389 - P4HB chr17 81843161 81860624 - RPS16 chr19 39433137 39435949 - VAMP5 chr2 85584431 85593406 + SPECC1L-ADORA2A chr22 24270898 24442356 + TMSB4X chrX 12975110 12977227 + MCM2 chr3 127598410 127622436 + ACTG1 chr17 81509971 81523847 - EIF3D chr22 36510855 36529184 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AL121832.3 chr20 62402236 62405935 - AL137127.1 chr1 19072110 19075511 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA