exRNAdisease

Entry Detail

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General Information

Database ID: exR0373703 RNA Name: ADPRH RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 119579268 End Site(bp): 119589945 External Links: ENSG00000144843

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AHCY chr20 34280268 34311802 - CFL1 chr11 65823022 65862026 - COX7A2 chr6 75237675 75250323 - ECHDC2 chr1 52895910 52927212 - EDARADD chr1 236348257 236502915 + FCER2 chr19 7688758 7702146 - FTL chr19 48965309 48966879 + MFSD12 chr19 3538261 3574290 - MRM2 chr7 2234195 2242205 - MRPS26 chr20 3046052 3048250 + MYO18A chr17 29071124 29180412 - NACA2 chr17 61590421 61591219 - NCL chr2 231453531 231483641 - PGRMC1 chrX 119236245 119244466 + PSME1 chr14 24136163 24138967 + RACK1 chr5 181236897 181248096 - RAF1 chr3 12583601 12664226 - RIOX2 chr3 97941818 97972457 - RPL37A chr2 216498825 216579180 + RPLP0 chr12 120196699 120201235 - RPS2 chr16 1962058 1964841 - RPS25 chr11 119015712 119018691 - RSRC2 chr12 122503454 122527000 - SIAH2 chr3 150741125 150763477 - SLC25A6 chrX 1386152 1392113 - STARD7 chr2 96184859 96208825 - SUB1 chr5 32531633 32604079 + TMSB4X chrX 12975110 12977227 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA