exRNAdisease

Entry Detail

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General Information

Database ID: exR0373706 RNA Name: ADPRM RNA Type: mRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 10697594 End Site(bp): 10711558 External Links: ENSG00000170222

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007192.1 chr19 18153158 18178117 + BAG5 chr14 103556544 103562831 - CDKN1A chr6 36676460 36687339 + CDV3 chr3 133573730 133590261 + FAU chr11 65120630 65122177 - HSP90AB1 chr6 44246166 44253888 + HSPA4 chr5 133052013 133106449 + IFI30 chr19 18173162 18178117 + ITM2B chr13 48232612 48270357 + PABPC3 chr13 25095868 25099254 + PTP4A2 chr1 31906421 31944856 - SDC2 chr8 96493813 96611790 + THRAP3 chr1 36224432 36305357 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA