Entry Detail


General Information

Database ID:exR0373719
RNA Name:AEBP1
RNA Type:mRNA
Chromosome:chr7
Starnd:+
Coordinate:
Start Site(bp):44104345End Site(bp):44114562
External Links:ENSG00000106624



Disease Information

Disease Name:Low Birth Weight
Disease Category:Other Diseases
MeSH ID:D007230
Type:Age Groups/Infant
Alias:Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights



Expression Detail

GEO ID:GSE29807
Description:Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns
Experimental Design:Disease vs Control
Case Disease Type:Low Birth Weight
Case Disease SubType:NA
Case Sample:Low Birth Weight
Control Sample:Normal
Number of Case:8
Number of Control:4
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
COPS7B
chr2
231781671
231809254
+
DUSP5
chr10
110497907
110511533
+
HM13
chr20
31514410
31577923
+
HMGCS1
chr5
43287470
43313512
-
MINDY2
chr15
58771192
58861900
+
MT-CO1
chrMT
5904
7445
+
RPL27A
chr11
8682788
8714759
+
RUVBL2
chr19
48993562
49015970
+
SRSF10
chr1
23964347
23980927
-
SUN1
chr7
816615
896435
+
TALDO1
chr11
747415
765012
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE29807
Sample Source:Cord Blood
Source Fraction:Umblical Cord Blood
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions.
RNA library preparation protocol:Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA