exRNAdisease

Entry Detail

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General Information

Database ID: exR0373780 RNA Name: AHI1 RNA Type: mRNA Chromosome: chr6 Starnd: - Coordinate: Start Site(bp): 135283532 End Site(bp): 135497765 External Links: ENSG00000135541

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand EIF4H chr7 74174245 74197101 + FAM83D chr20 38926312 38953106 + MT-CO2 chrMT 7586 8269 + MT-ND2 chrMT 4470 5511 + MTCL1 chr18 8705661 8832778 + PARD6B chr20 50731580 50756795 + PCBP2 chr12 53452102 53481162 + RPS21 chr20 62387103 62388520 + TBL1XR1 chr3 177019340 177228000 - TMEM245 chr9 109015135 109119947 - TNRC6B chr22 40044817 40335808 + TUBB chr6 30720352 30725426 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC078846.1 chr7 129604548 129611630 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA