Entry Detail



General Information

Database ID:exR0373790
RNA Name:AIF1
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):31615217End Site(bp):31617021
External Links:ENSG00000204472



Disease Information

Disease Name:Low Birth Weight
Disease Category:Other Diseases
MeSH ID:D007230
Type:Age Groups/Infant
Alias:Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights



Expression Detail

GEO ID:GSE29807
Description:Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns
Experimental Design:Disease vs Control
Case Disease Type:Low Birth Weight
Case Disease SubType:NA
Case Sample:Low Birth Weight
Control Sample:Normal
Number of Case:8
Number of Control:4
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AACS
chr12
125065434
125143333
+
AC008403.1
chr19
48465837
48472431
+
ANP32B
chr9
97983341
98015943
+
CCT7
chr2
73233420
73253021
+
COX7A2L
chr2
42333546
42425088
-
CYTH2
chr19
48469208
48482314
+
DAXX
chr6
33318558
33323016
-
GCK
chr7
44143213
44198170
-
IAH1
chr2
9473658
9496543
+
LEF1
chr4
108047545
108168956
-
NDUFA4
chr7
10931943
10940153
-
NDUFB9
chr8
124539101
124580648
+
RACK1
chr5
181236897
181248096
-
RBPJ
chr4
26163455
26435131
+
RPL27A
chr11
8682788
8714759
+
RPL37A
chr2
216498825
216579180
+
RPLP2
chr11
809965
812880
+
SIPA1L3
chr19
37907208
38208369
+
SRP9
chr1
225777813
225790468
+
TCF15
chr20
603797
610398
-
TUBA1A
chr12
49184795
49189080
-
UQCC3
chr11
62670273
62673686
+
ZNF322
chr6
26634383
26659752
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE29807
Sample Source:Cord Blood
Source Fraction:Umblical Cord Blood
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions.
RNA library preparation protocol:Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA