exRNAdisease

Entry Detail

---



General Information

Database ID: exR0373793 RNA Name: AIFM2 RNA Type: mRNA Chromosome: chr10 Starnd: - Coordinate: Start Site(bp): 70098223 End Site(bp): 70132934 External Links: ENSG00000042286

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AACS chr12 125065434 125143333 + AC105052.1 chr7 102582523 102642869 - BTF3 chr5 73498408 73505635 + DCP2 chr5 112976702 113022195 + DNM2 chr19 10718079 10833488 + FOXM1 chr12 2857681 2877155 - FTL chr19 48965309 48966879 + GPX4 chr19 1103926 1106791 + HMGN1 chr21 39342315 39349647 - MT-CO3 chrMT 9207 9990 + MUTYH chr1 45329163 45340893 - PAFAH1B1 chr17 2593210 2685615 + PGK1 chrX 77910739 78129295 + PLEKHM2 chr1 15684320 15734769 + RASA4 chr7 102573807 102616757 - RPL13 chr16 89560657 89566828 + RPLP2 chr11 809965 812880 + TPT1 chr13 45333471 45341370 - TYSND1 chr10 70137981 70146700 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA