exRNAdisease

Entry Detail

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General Information

Database ID: exR0373822 RNA Name: AKAP5 RNA Type: mRNA Chromosome: chr14 Starnd: + Coordinate: Start Site(bp): 64465499 End Site(bp): 64474503 External Links: ENSG00000179841

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010463.1 chr19 17267418 17282966 + AC023055.1 chr12 55757275 55827546 - BABAM1 chr19 17267376 17281249 + CNPY3 chr6 42929192 42939294 + EIF3I chr1 32221928 32231604 + GNB1 chr1 1785285 1891117 - PPP2R1B chr11 111726908 111766389 - PSMB5 chr14 23016543 23035230 - RPS16 chr19 39433137 39435949 - RPS3 chr11 75399515 75422280 + SARNP chr12 55752463 55817724 - ZNF141 chr4 337814 384868 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA