Entry Detail


General Information

Database ID:exR0374102
RNA Name:AP2A2
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):924894End Site(bp):1012245
External Links:ENSG00000183020



Disease Information

Disease Name:Low Birth Weight
Disease Category:Other Diseases
MeSH ID:D007230
Type:Age Groups/Infant
Alias:Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights



Expression Detail

GEO ID:GSE29807
Description:Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns
Experimental Design:Disease vs Control
Case Disease Type:Low Birth Weight
Case Disease SubType:NA
Case Sample:Low Birth Weight
Control Sample:Normal
Number of Case:8
Number of Control:4
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACTG1
chr17
81509971
81523847
-
ADAMTS9
chr3
64515654
64688000
-
AK3
chr9
4709556
4742043
-
AKAP10
chr17
19904302
19978343
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006064.2
chr12
6578622
6584739
+
AC007952.4
chr17
19112000
19112636
-
AC027307.2
chr19
1457670
1458580
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:GSE29807
Sample Source:Cord Blood
Source Fraction:Umblical Cord Blood
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions.
RNA library preparation protocol:Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA