Entry Detail


General Information

Database ID:exR0374145
RNA Name:APLP1
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):35867899End Site(bp):35879791
External Links:ENSG00000105290



Disease Information

Disease Name:Low Birth Weight
Disease Category:Other Diseases
MeSH ID:D007230
Type:Age Groups/Infant
Alias:Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights



Expression Detail

GEO ID:GSE29807
Description:Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns
Experimental Design:Disease vs Control
Case Disease Type:Low Birth Weight
Case Disease SubType:NA
Case Sample:Low Birth Weight
Control Sample:Normal
Number of Case:8
Number of Control:4
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD11
chr7
73736094
73738867
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010325.2
chr19
50792685
50793584
-
AC019069.1
chr2
74832655
74833987
-
AC020928.1
chr19
36773112
36777078
+
AC096536.1
chr1
54792885
54794905
+
AC096536.3
chr1
54874672
54883664
+
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE29807
Sample Source:Cord Blood
Source Fraction:Umblical Cord Blood
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions.
RNA library preparation protocol:Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA