exRNAdisease

Entry Detail

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General Information

Database ID: exR0374894 RNA Name: BRWD1 RNA Type: mRNA Chromosome: chr21 Starnd: - Coordinate: Start Site(bp): 39184176 End Site(bp): 39321559 External Links: ENSG00000185658

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCB10 chr1 229516582 229558707 - AC008982.1 chr19 38817471 38840178 - AC010422.3 chr19 12643831 12648397 - AC026954.2 chr17 7312661 7319174 - AC068946.2 chr2 219209772 219222738 - AC104452.1 chr3 49416777 49429314 - ADCY9 chr16 3953387 4116442 - ADGRG6 chr6 142301854 142446266 + ADORA2A chr22 24417879 24442357 + ADPRHL2 chr1 36088892 36093932 + AGAP3 chr7 151085831 151144436 + AGO2 chr8 140520156 140635633 - AL136295.1 chr14 24189157 24213473 - ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-19a-3p chr13 91350939 91350961 + hsa-miR-23b-3p chr9 95085265 95085287 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC012146.1 chr17 5111468 5115004 + AC016876.2 chr17 7581964 7584086 - AC018521.1 chr17 47945424 47981736 + AC067930.1 chr8 143579636 143580670 + AD000090.1 chr19 35557956 35581954 + AL096870.2 chr14 24209646 24215987 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA