exRNAdisease

Entry Detail

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General Information

Database ID: exR0374920 RNA Name: BTF3 RNA Type: mRNA Chromosome: chr5 Starnd: + Coordinate: Start Site(bp): 73498408 End Site(bp): 73505635 External Links: ENSG00000145741

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008982.1 chr19 38817471 38840178 - AC010422.3 chr19 12643831 12648397 - AC010646.1 chr19 17235940 17255448 - AC011448.1 chr19 19516227 19536076 + AC092073.1 chr19 34396315 34409364 + ACTB chr7 5527148 5563784 - ACTR3 chr2 113890063 113962596 + ADGRL1 chr19 14147743 14206187 - AFF2 chrX 148500617 149000663 + AGA chr4 177430774 177442437 - AIFM2 chr10 70098223 70132934 - AKAP8 chr19 15353385 15379798 - AL121594.1 chr14 35122549 35317474 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC091564.7 chr11 6610883 6616594 - AC092306.1 chr19 44803701 44804010 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA