exRNAdisease

Entry Detail

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General Information

Database ID: exR0376276 RNA Name: CLIC1 RNA Type: mRNA Chromosome: chr6 Starnd: - Coordinate: Start Site(bp): 31730581 End Site(bp): 31739763 External Links: ENSG00000213719

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004922.1 chr7 99325879 99394653 + AC006030.1 chr2 74211604 74363377 - AC008763.3 chr19 7678501 7682854 + AC010132.3 chr7 42909273 42932174 - AC011448.1 chr19 19516227 19536076 + AC012184.2 chr16 70299194 70372582 + AC107959.5 chr8 23084403 23115536 + ACIN1 chr14 23058564 23095614 - ACTB chr7 5527148 5563784 - AD000671.2 chr19 35739252 35745432 - AGPAT4 chr6 161129967 161274061 - AHNAK chr11 62433542 62556235 - AKT1 chr14 104769349 104795751 - AL133352.1 chr10 100505628 100529881 - ALAS1 chr3 52198086 52214327 + ALDH18A1 chr10 95605941 95656711 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-7703 chr14 24143489 24143511 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010325.2 chr19 50792685 50793584 - AC107959.4 chr8 23084355 23103558 + AC245014.3 chr1 145281116 145281462 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA