exRNAdisease

Entry Detail

---



General Information

Database ID: exR0376614 RNA Name: CRABP2 RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 156699606 End Site(bp): 156705816 External Links: ENSG00000143320

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAGAB chr15 67200667 67255195 - ABHD17A chr19 1876810 1885547 - AC004922.1 chr7 99325879 99394653 + AC073508.2 chr17 40627356 40665141 - ACOT2 chr14 73567620 73575658 + ACSS3 chr12 80936414 81261210 + ACTR1A chr10 102461881 102502712 - ACTR3B chr7 152759749 152855378 + AFF2 chrX 148500617 149000663 + AHCYL1 chr1 109984765 110023742 + AIF1L chr9 131096476 131123152 + AK2 chr1 33007940 33080996 - AKT1S1 chr19 49869033 49878459 - AL136454.1 chr1 192716132 192716653 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC021504.1 chr18 41465783 41632185 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA