exRNAdisease

Entry Detail

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General Information

Database ID: exR0377109 RNA Name: DDOST RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 20651767 End Site(bp): 20661544 External Links: ENSG00000244038

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCF1 chr6 30571393 30597179 + ABHD14B chr3 51968510 51983409 - ABO chr9 133250401 133276024 - AC007192.1 chr19 18153158 18178117 + AC024592.3 chr19 5866171 5903787 - AC104452.1 chr3 49416777 49429314 - AC104581.2 chr17 7925931 7930622 - AC118549.1 chr1 77562416 77683419 - ACACA chr17 37084992 37406836 - ACAP3 chr1 1292390 1309609 - ACTG1 chr17 81509971 81523847 - ADAM23 chr2 206443532 206621127 + ADAMTS19 chr5 129460281 129738683 + ADD3 chr10 109996368 110135565 + ADSL chr22 40346500 40390463 + AGFG1 chr2 227472152 227561214 + AGPAT5 chr8 6708642 6761503 + AHCYL2 chr7 129225023 129430211 + AL022238.4 chr22 40346529 40410054 + AL121594.1 chr14 35122549 35317474 + AL136295.4 chr14 24180395 24190416 - ALDH1B1 chr9 38392702 38398661 + ALDH9A1 chr1 165662216 165698863 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC067930.1 chr8 143579636 143580670 + AC092490.1 chr12 8788253 8795789 + AC106864.1 chr4 112693047 112706810 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA