exRNAdisease

Entry Detail

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General Information

Database ID: exR0377617 RNA Name: DYNLL2 RNA Type: mRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 58083419 End Site(bp): 58095542 External Links: ENSG00000264364

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCF2 chr7 151207837 151227166 - ABHD17A chr19 1876810 1885547 - AC010422.3 chr19 12643831 12648397 - AC027644.4 chr7 66628958 66811189 + AC073508.2 chr17 40627356 40665141 - AC073896.1 chr12 56285916 56316059 - AC104452.1 chr3 49416777 49429314 - ACACA chr17 37084992 37406836 - ACBD4 chr17 45132600 45144181 + ACTB chr7 5527148 5563784 - ADAM15 chr1 155050566 155062775 + ADO chr10 62804720 62808479 + AFG3L2 chr18 12328944 12377227 - AKAP12 chr6 151239967 151358559 + AL121594.1 chr14 35122549 35317474 + ALCAM chr3 105366909 105576900 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007218.1 chr16 9666885 9676843 - AC016876.2 chr17 7581964 7584086 - AC024940.6 chr12 31280422 31280895 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA