exRNAdisease

Entry Detail

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General Information

Database ID: exR0377780 RNA Name: EIF3A RNA Type: mRNA Chromosome: chr10 Starnd: - Coordinate: Start Site(bp): 119033670 End Site(bp): 119080823 External Links: ENSG00000107581

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC120057.2 chr17 7240427 7244635 - AC137834.1 chr12 57249609 57296484 - ACIN1 chr14 23058564 23095614 - ACTB chr7 5527148 5563784 - ADAM17 chr2 9488486 9556732 - ADGRA3 chr4 22345071 22516066 - AFG3L2 chr18 12328944 12377227 - AHCYL1 chr1 109984765 110023742 + AKAP8L chr19 15380050 15419141 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC060780.1 chr17 43148368 43171037 - AC087741.1 chr17 80200673 80205949 - AC245014.3 chr1 145281116 145281462 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA