exRNAdisease

Entry Detail

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General Information

Database ID: exR0377782 RNA Name: EIF3C RNA Type: mRNA Chromosome: chr16 Starnd: + Coordinate: Start Site(bp): 28688558 End Site(bp): 28735730 External Links: ENSG00000184110

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AARS2 chr6 44298731 44313347 - ABCB9 chr12 122920951 122981649 - AC005258.1 chr19 2269525 2341172 + AC005943.1 chr19 1578339 1605445 - AC010422.3 chr19 12643831 12648397 - AC092143.1 chr16 89919165 89936092 + AC110275.1 chr8 43018424 43077334 + AC245033.1 chr15 82536788 82573194 - ACBD4 chr17 45132600 45144181 + ACER3 chr11 76860867 77026797 + ACKR3 chr2 236567787 236582354 + ACO2 chr22 41469117 41528989 + ACTG1 chr17 81509971 81523847 - ADD3 chr10 109996368 110135565 + AFF4 chr5 132875395 132963634 - AGPAT3 chr21 43865223 43987592 + AIF1L chr9 131096476 131123152 + AL109827.1 chr20 35632340 35674544 - ALDH7A1 chr5 126531200 126595362 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC009022.1 chr16 69976297 70065948 - AC010327.5 chr19 55216660 55221616 + AC016876.2 chr17 7581964 7584086 - AC026362.1 chr12 122975320 122982907 + AC090204.1 chr8 32927913 33045445 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA