exRNAdisease

Entry Detail

---



General Information

Database ID: exR0377792 RNA Name: EIF3L RNA Type: mRNA Chromosome: chr22 Starnd: + Coordinate: Start Site(bp): 37848868 End Site(bp): 37889407 External Links: ENSG00000100129

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAMDC chr11 77821109 77918432 + ACLY chr17 41866917 41930542 - AC008763.3 chr19 7678501 7682854 + AHCYL1 chr1 109984765 110023742 + ACBD3 chr1 226144679 226186741 - ADD1 chr4 2843857 2930076 + AASS chr7 122073549 122144255 - AGPS chr2 177392757 177559299 + AC245033.1 chr15 82536788 82573194 - ACTA1 chr1 229431245 229434098 - AC023055.1 chr12 55757275 55827546 - AC007192.1 chr19 18153158 18178117 + ACIN1 chr14 23058564 23095614 - ABCD3 chr1 94418389 94518666 + ADAMTSL4 chr1 150549369 150560937 + AAMP chr2 218264123 218270257 - ADH5 chr4 99070978 99088801 - AL033529.1 chr1 32465057 32600792 + AGPAT5 chr8 6708642 6761503 + ABCF2 chr7 151207837 151227166 - AL513165.2 chr9 37512547 37592469 - ABCA1 chr9 104781006 104928155 - ACTR3B chr7 152759749 152855378 + AL139353.1 chr14 31334312 31457441 - AC010615.4 chr19 21405159 21491266 + ACADVL chr17 7217125 7225266 + AL035078.4 chr11 31812391 32104665 + ABR chr17 1003518 1229738 - AL358113.1 chr9 69035747 69255187 + ACTB chr7 5527148 5563784 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-155-5p chr21 25573983 25574006 + hsa-miR-1248 chr3 186786675 186786701 + hsa-miR-6733-3p chr1 43171652 43171671 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008738.7 chr19 33207129 33207639 + AC012213.4 chr8 103481266 103481619 - AC016876.2 chr17 7581964 7584086 - AC024940.6 chr12 31280422 31280895 - AC079781.5 chr7 97851688 97972985 - AC245014.3 chr1 145281116 145281462 + AD000090.1 chr19 35557956 35581954 + AL022311.1 chr22 37876148 37895563 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA