exRNAdisease

Entry Detail

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General Information

Database ID: exR0377795 RNA Name: EIF4A2 RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 186783205 End Site(bp): 186789897 External Links: ENSG00000156976

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABT1 chr6 26596953 26600739 + AC005832.4 chr12 4604944 4662643 + AC008878.3 chr19 7382834 7470241 + AC008982.1 chr19 38817471 38840178 - AC036214.3 chr8 79918860 80080775 - AC073508.2 chr17 40627356 40665141 - AC245033.1 chr15 82536788 82573194 - ACAD9 chr3 128879596 128916067 + ACTG1 chr17 81509971 81523847 - ADAM10 chr15 58588809 58749791 - ADD3 chr10 109996368 110135565 + ADK chr10 74151202 74709963 + ADRM1 chr20 62302093 62308862 + AEN chr15 88621337 88632281 + AFTPH chr2 64524305 64593005 + AGPAT3 chr21 43865223 43987592 + AHCY chr20 34280268 34311802 - ALDH6A1 chr14 74056847 74084492 - ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-19b-3p chr13 91351245 91351267 + hsa-miR-21-5p chr17 59841273 59841294 + hsa-miR-1248 chr3 186786675 186786701 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC016876.2 chr17 7581964 7584086 - AC051619.7 chr15 45200325 45200632 - AC105942.1 chr1 94927361 94963616 + AC106864.1 chr4 112693047 112706810 - AC144548.1 chr12 110387463 110445548 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA