exRNAdisease

Entry Detail

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General Information

Database ID: exR0377806 RNA Name: EIF4G2 RNA Type: mRNA Chromosome: chr11 Starnd: - Coordinate: Start Site(bp): 10797050 End Site(bp): 10808940 External Links: ENSG00000110321

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AASDHPPT chr11 106075501 106098699 + ABCC1 chr16 15949577 16143074 + ABHD17B chr9 71862452 71910931 - ABHD8 chr19 17292131 17310236 - ABI1 chr10 26746593 26861087 - ABR chr17 1003518 1229738 - AC004922.1 chr7 99325879 99394653 + AC005020.2 chr7 99558695 99607810 + AC005324.4 chr17 15699692 15744778 + AC018512.1 chr15 43772617 43799133 - AC073896.1 chr12 56285916 56316059 - AC120057.2 chr17 7240427 7244635 - ACP1 chr2 264140 278283 + ACTG1 chr17 81509971 81523847 - ADSL chr22 40346500 40390463 + AFDN chr6 167826922 167972023 + AGPAT4 chr6 161129967 161274061 - AKAP12 chr6 151239967 151358559 + AKIRIN1 chr1 38991276 39006059 + AL022238.4 chr22 40346529 40410054 + AL590132.1 chr1 210858125 211134146 - ALAD chr9 113386312 113401290 - ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-92a-3p chrX 134169544 134169565 - hsa-miR-4485-3p chr11 10508277 10508296 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004812.2 chr12 120116907 120119000 + AC025279.1 chr16 29291220 29372110 + AC087190.3 chr16 9104848 9113181 + AC126365.1 chr17 20788071 20789584 + AD000090.1 chr19 35557956 35581954 + AL132780.1 chr14 22929607 22956374 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA