exRNAdisease

Entry Detail

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General Information

Database ID: exR0377847 RNA Name: ELOVL5 RNA Type: mRNA Chromosome: chr6 Starnd: - Coordinate: Start Site(bp): 53267398 End Site(bp): 53349179 External Links: ENSG00000012660

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AASS chr7 122073549 122144255 - ABCA2 chr9 137007234 137028922 - ABCF2 chr7 151207837 151227166 - AC009133.6 chr16 29812261 29820092 + AC090517.4 chr15 56652488 56918571 - AC114490.3 chr1 34974356 34985313 - AC118553.2 chr1 99970011 100083321 + ACTR2 chr2 65227753 65271253 + ADA chr20 44619522 44652233 - ADAM17 chr2 9488486 9556732 - ADSL chr22 40346500 40390463 + AHNAK chr11 62433542 62556235 - AKIRIN2 chr6 87674860 87702233 - AL022238.4 chr22 40346529 40410054 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC079781.5 chr7 97851688 97972985 - AC091564.7 chr11 6610883 6616594 - AC107959.2 chr8 23068229 23083619 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA