exRNAdisease

Entry Detail

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General Information

Database ID: exR0377963 RNA Name: EPN1 RNA Type: mRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 55675226 End Site(bp): 55709858 External Links: ENSG00000063245

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AASDH chr4 56338287 56387508 - AC010422.3 chr19 12643831 12648397 - AC011448.1 chr19 19516227 19536076 + AC046185.1 chr17 63702845 63752097 - AC048338.1 chr12 122207779 122266423 - ACTN4 chr19 38647649 38731589 + ADGRA3 chr4 22345071 22516066 - ADGRG6 chr6 142301854 142446266 + ADNP chr20 50888916 50931437 - AGRN chr1 1020120 1056118 + AHCY chr20 34280268 34311802 - AHNAK chr11 62433542 62556235 - AIMP2 chr7 6009255 6023834 + AJM1 chr9 136844415 136848801 + AKAP13 chr15 85380571 85749358 + AKT2 chr19 40230317 40285536 - AL162417.1 chr9 133098121 133163914 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA