exRNAdisease

Entry Detail

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General Information

Database ID: exR0378408 RNA Name: FBXL19 RNA Type: mRNA Chromosome: chr16 Starnd: + Coordinate: Start Site(bp): 30923055 End Site(bp): 30948783 External Links: ENSG00000099364

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCA2 chr9 137007234 137028922 - ABL2 chr1 179099330 179229684 - ABRACL chr6 139028745 139043302 + AC018523.2 chr11 14493783 14520344 - AC233992.2 chr8 144353228 144355609 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ADAMTS19 chr5 129460281 129738683 + ADRM1 chr20 62302093 62308862 + AFF3 chr2 99545419 100192428 - AGO3 chr1 35930718 36072500 + AGRN chr1 1020120 1056118 + AL031708.1 chr16 1632259 1686715 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-22-3p chr17 1713914 1713935 - hsa-miR-324-3p chr17 7223308 7223330 - hsa-miR-625-5p chr14 65471116 65471136 + hsa-miR-423-5p chr17 30117095 30117117 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC125807.2 chr12 3041437 3044950 + AC135048.1 chr16 30948386 30956511 + AC245014.3 chr1 145281116 145281462 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA