exRNAdisease

Entry Detail

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General Information

Database ID: exR0378465 RNA Name: FCER2 RNA Type: mRNA Chromosome: chr19 Starnd: - Coordinate: Start Site(bp): 7688758 End Site(bp): 7702146 External Links: ENSG00000104921

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABHD17A chr19 1876810 1885547 - AC004832.3 chr22 30409255 30428990 + AC005258.1 chr19 2269525 2341172 + AC008982.1 chr19 38817471 38840178 - AC055811.2 chr17 17202649 17237185 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ADPRH chr3 119579268 119589945 + AEN chr15 88621337 88632281 + AKR7A2 chr1 19303965 19312146 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC012236.1 chr15 31221999 31230838 - AC016876.2 chr17 7581964 7584086 - AC026362.1 chr12 122975320 122982907 + AD000090.1 chr19 35557956 35581954 + AL138828.1 chr6 135991936 136225751 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA