exRNAdisease

Entry Detail

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General Information

Database ID: exR0378610 RNA Name: FLNA RNA Type: mRNA Chromosome: chrX Starnd: - Coordinate: Start Site(bp): 154348524 End Site(bp): 154374638 External Links: ENSG00000196924

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AATF chr17 36948954 37056871 + ABCA2 chr9 137007234 137028922 - ABHD17A chr19 1876810 1885547 - AC008403.1 chr19 48465837 48472431 + AC008982.1 chr19 38817471 38840178 - AC027644.4 chr7 66628958 66811189 + AC138969.1 chr16 16317444 16350590 + AC233992.2 chr8 144353228 144355609 - AC245033.1 chr15 82536788 82573194 - ACIN1 chr14 23058564 23095614 - ACTB chr7 5527148 5563784 - ADAMTS1 chr21 26835755 26845409 - ADAMTS19 chr5 129460281 129738683 + ADAMTSL4 chr1 150549369 150560937 + ADCY3 chr2 24819169 24919839 - ADCY6 chr12 48766194 48789037 - ADGRE5 chr19 14380501 14408725 + ADIPOR1 chr1 202940826 202958572 - ADNP2 chr18 80109262 80147523 + AFDN chr6 167826922 167972023 + AFG3L2 chr18 12328944 12377227 - AFMID chr17 78187317 78207701 + AGO2 chr8 140520156 140635633 - AGPAT1 chr6 32168212 32178096 - AGRN chr1 1020120 1056118 + AIP chr11 67483026 67491103 + AK4 chr1 65147549 65232145 + AKT2 chr19 40230317 40285536 - AL807752.6 chr9 137031241 137040436 - ALDH7A1 chr5 126531200 126595362 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-103a-3p chr5 168560904 168560926 - hsa-miR-5100 chr10 42997630 42997651 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC015961.2 chr18 37243776 37247506 + AC026362.1 chr12 122975320 122982907 + AC079781.5 chr7 97851688 97972985 - AD000090.1 chr19 35557956 35581954 + AL021707.2 chr22 38667585 38681847 - AL137127.1 chr1 19072110 19075511 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA