exRNAdisease

Entry Detail

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General Information

Database ID: exR0378996 RNA Name: GDI2 RNA Type: mRNA Chromosome: chr10 Starnd: - Coordinate: Start Site(bp): 5765223 End Site(bp): 5842132 External Links: ENSG00000057608

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ADH5 chr4 99070978 99088801 - ABHD17A chr19 1876810 1885547 - ADIPOR2 chr12 1688574 1788674 + ACAA2 chr18 49782164 49813953 - AC026954.2 chr17 7312661 7319174 - AC010422.3 chr19 12643831 12648397 - AC245033.1 chr15 82536788 82573194 - AC008763.2 chr19 7629796 7643048 + ADCY6 chr12 48766194 48789037 - ADO chr10 62804720 62808479 + ACTB chr7 5527148 5563784 - ADK chr10 74151202 74709963 + AC073283.3 chr2 47065941 47176511 - ACADVL chr17 7217125 7225266 + ALDOA chr16 30064164 30070457 + AD000671.1 chr19 35745678 35754519 + ACADM chr1 75724347 75787575 + ADCY2 chr5 7396138 7830081 + ADAMTS19 chr5 129460281 129738683 + ADAMTS13 chr9 133414358 133459402 + ACTG1 chr17 81509971 81523847 - ACSL3 chr2 222860942 222944639 + AC073508.2 chr17 40627356 40665141 - AFDN chr6 167826922 167972023 + AFG3L2 chr18 12328944 12377227 - ACOT9 chrX 23701055 23766475 - ALDH18A1 chr10 95605941 95656711 - AC000093.1 chr22 19717220 19724772 + ACSS2 chr20 34872146 34927962 + ABHD17B chr9 71862452 71910931 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC009446.1 chr8 71675300 71702786 + AC010542.4 chr16 66549280 66551189 + AC016876.2 chr17 7581964 7584086 - AC124068.2 chr15 89335053 89336161 + AC147067.1 chr4 1574062 1580253 - AC245033.4 chr15 82533175 82540008 - AL021707.2 chr22 38667585 38681847 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA