exRNAdisease

Entry Detail

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General Information

Database ID: exR0379146 RNA Name: GLUL RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 182381704 End Site(bp): 182392206 External Links: ENSG00000135821

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCF1 chr6 30571393 30597179 + ABHD10 chr3 111979010 111993368 + ABL1 chr9 130713016 130887675 + ABL2 chr1 179099330 179229684 - AC005943.1 chr19 1578339 1605445 - AC008878.2 chr19 7533595 7540059 + AC011448.1 chr19 19516227 19536076 + ACKR3 chr2 236567787 236582354 + ADI1 chr2 3497366 3519531 - ADIPOR1 chr1 202940826 202958572 - ADK chr10 74151202 74709963 + AHCY chr20 34280268 34311802 - AIMP2 chr7 6009255 6023834 + ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-7111-3p chr6 35470558 35470579 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC010542.4 chr16 66549280 66551189 + AC016876.2 chr17 7581964 7584086 - AC040162.3 chr16 67882461 67886367 + AC132217.1 chr11 2129121 2129964 - AL031673.1 chr20 25680781 25681246 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA