exRNAdisease

Entry Detail

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General Information

Database ID: exR0379245 RNA Name: GOLPH3 RNA Type: mRNA Chromosome: chr5 Starnd: - Coordinate: Start Site(bp): 32124716 End Site(bp): 32174319 External Links: ENSG00000113384

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAGAB chr15 67200667 67255195 - AASDH chr4 56338287 56387508 - ABHD17A chr19 1876810 1885547 - AC005258.1 chr19 2269525 2341172 + AC010323.1 chr19 8308283 8321379 - AC040162.1 chr16 67929614 67936017 - AC139530.2 chr17 81703371 81720539 + ACIN1 chr14 23058564 23095614 - ACTB chr7 5527148 5563784 - ACVR1B chr12 51951699 51997078 + AD000671.1 chr19 35745678 35754519 + ADAM11 chr17 44758988 44781846 + ADGRB1 chr8 142449430 142545009 + AKAP8 chr19 15353385 15379798 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC103702.1 chr17 48579630 48582259 - AC113189.4 chr17 7439506 7445966 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA