exRNAdisease

Entry Detail

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General Information

Database ID: exR0379809 RNA Name: HNRNPA2B1 RNA Type: mRNA Chromosome: chr7 Starnd: - Coordinate: Start Site(bp): 26173057 End Site(bp): 26201529 External Links: ENSG00000122566

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ACTR3 chr2 113890063 113962596 + ADCK2 chr7 140672945 140696261 + AEBP2 chr12 19404045 19720801 + ABHD14B chr3 51968510 51983409 - ACAT2 chr6 159762045 159779112 + ACIN1 chr14 23058564 23095614 - AC124312.1 chr15 24955034 25000276 + ADGRA3 chr4 22345071 22516066 - AHCY chr20 34280268 34311802 - ACTG1 chr17 81509971 81523847 - AKR7A2 chr1 19303965 19312146 - ADGRG1 chr16 57610652 57665580 + AKNA chr9 114334156 114394405 - AL035078.4 chr11 31812391 32104665 + AC006978.2 chr7 30362400 30412502 + ADNP chr20 50888916 50931437 - ALDOA chr16 30064164 30070457 + AEN chr15 88621337 88632281 + ADGRL1 chr19 14147743 14206187 - AC012184.2 chr16 70299194 70372582 + ABCG2 chr4 88090150 88231628 - ABHD4 chr14 22598237 22613215 + AC010422.3 chr19 12643831 12648397 - ACTG2 chr2 73892314 73919865 + AC104581.2 chr17 7925931 7930622 - AL365205.1 chr6 41780349 41790141 + ACTN4 chr19 38647649 38731589 + ACBD6 chr1 180269653 180502954 - ACTB chr7 5527148 5563784 - ADCY1 chr7 45574140 45723116 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-205-5p chr1 209432166 209432187 + hsa-miR-423-5p chr17 30117095 30117117 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC009005.1 chr19 567210 572228 - AC010618.3 chr19 17488990 17511889 - AC012615.1 chr19 1874871 1876169 - AC023509.1 chr12 53441741 53467528 + AC024940.6 chr12 31280422 31280895 - AC026362.1 chr12 122975320 122982907 + AC068473.5 chr18 79677287 79679358 - AC074135.1 chr19 23075201 23100361 + AC079781.5 chr7 97851688 97972985 - AC113189.2 chr17 7420103 7444081 + AC113189.4 chr17 7439506 7445966 + AC132217.1 chr11 2129121 2129964 - AD000090.1 chr19 35557956 35581954 + AL021707.1 chr22 38739003 38749041 + AL022311.1 chr22 37876148 37895563 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA