exRNAdisease

Entry Detail

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General Information

Database ID: exR0379812 RNA Name: HNRNPC RNA Type: mRNA Chromosome: chr14 Starnd: - Coordinate: Start Site(bp): 21209136 End Site(bp): 21269494 External Links: ENSG00000092199

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AASS chr7 122073549 122144255 - ABHD4 chr14 22598237 22613215 + ABLIM1 chr10 114431113 114768061 - AC006064.6 chr12 6556886 6607367 - AC006486.1 chr19 42234583 42255132 - AC007192.1 chr19 18153158 18178117 + AC011462.1 chr19 41350853 41425001 + AC024592.3 chr19 5866171 5903787 - AC026464.4 chr16 69299682 69322700 + AC058822.1 chr4 53377839 54295272 + AC092073.1 chr19 34396315 34409364 + AC245033.1 chr15 82536788 82573194 - ACAP2 chr3 195274745 195443044 - ACIN1 chr14 23058564 23095614 - ACTN1 chr14 68874143 68979440 - ACTR6 chr12 100199122 100241865 + ADGRV1 chr5 90529344 91164437 + ADH5 chr4 99070978 99088801 - AFDN chr6 167826922 167972023 + AGGF1 chr5 77029251 77065234 + AJUBA chr14 22971177 22982551 - AKIRIN2 chr6 87674860 87702233 - AL360181.3 chr10 133380017 133420271 + ALDH18A1 chr10 95605941 95656711 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006538.1 chr19 2727743 2729327 - AC007952.4 chr17 19112000 19112636 - AC008438.1 chr5 140370891 140401460 - AC018521.1 chr17 47945424 47981736 + AC023509.1 chr12 53441741 53467528 + AC023908.2 chr15 39770559 39801333 - AC106864.1 chr4 112693047 112706810 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA